آنالیز مقایسه‌ای ژنومی درختان صنعتی و تندرشد صنوبر و اکالیپتوس

Adhikari, S.; Saha, S.; Biswas, A.; Rana, T.S.; Bandyopadhyay, T. K.; Ghosh, P.; Application of molecular markers in plant genome analysis: a review. Nucleus 2017, 60: 283-297.

Ai, W.; Liu, Y.; Mei, M.; Zhang, X.; Tan, E.; Liu, H.; Han, X.; Zhan, H.; Lu, X.; A chromosome-scale genome assembly of the Mongolian oak (Quercus mongolica). Molecular Ecology Resources 2022, 22: 2396–2410.

Baldrich, P.; Bélanger, S.; Kong, S.; Pokhrel, S.; Tamim, S.; Teng, C.; Schiebout, C.; Guna, S. Gurazada, R.; Gupta, P.; Patel, P.; Razifard, H.; Nakano, M.; Dusia, A.; Meyers, B. C.; Frank, M. H.; The evolutionary history of small RNAs in Solanaceae. Plant Physiology 2022, 2: 644–665.

Bennetzen, J.L.; Transposable element contributions to plant gene and genome evolution. Plant Molecular Biology 2020, 42: 251–269.

Butler, J.B.; Freeman, J.S.; Potts, B.M.; Annotation of the Corymbia terpene synthase gene family shows broad conservation but dynamic evolution of physical clusters relative to Eucalyptus. Heredity 2018, 121, 87–104.

Butler, J.B.; Vaillancourt, R.E.; Potts, B.M; Comparative genomics of Eucalyptus and Corymbia reveals low rates of genome structural rearrangement. BMC Genomics 2017, 18, 397.

Heissl, A.; Betancourt, A.J.; Hermann, P.; Povysil, G.; Arbeithuber, B.; Futschik, A.; Ebner, T.; Tiemann-Boege, I.; Length asymmetry and heterozygosity strongly influences the evolution of poly-A microsatellites at meiotic recombination hotspots. BioRxiv 2018, 431841.

Hernández, M.A.; Vaillancourt, R.E.; Potts, B.M.; Insights into the evolution of the eucalypt CER1 and CER3 genes involved in the synthesis of alkane waxes. Tree Genetics and Genomes 2024, 20: 1-15.

MirMohammadi Maibody, S.A.M.; Golkar, P.; Application of DNA molecular markers in plant breeding. Journal of Plant Genetic Researches 2019, 6 (1): 1-30 (In Persian).

Mohammadi, Y.; Banaei-Asl, F.; Espahbodi, K.; Evaluation of genetic relationships of selected Ash trees for seed orchard formation at ‎Chamestan research station. Forest Research and Development 2023, 9: 17-27 (In Persian).

Myburg, A.A.; Grattapaglia, D.; Tuskan, G.A.; Hellsten, U.; Hayes, R.D.; Grimwood, J.; Jenkins, J.; Lindquist, E.; Tice, H.; Bauer, D.; The genome of Eucalyptus grandis. Nature 2014, 510: 356–62.

Onda, Y.; Mochida, K.; Exploring genetic diversity in plants using high-throughput sequencing techniques. Current Genomics 2016, 17(4): 358.

Pancaldi, F.; Vlegels, D.; Rijken, H.; van Loo, E.N.; Trindade, L.M.; Detection and analysis of syntenic quantitative trait loci controlling cell wall quality in angiosperms. Frontier Plant Science 2022, 13: 855093.

Potter, K.M.; Hipkins, V.D.; Mahalovich, M.F.; Means, R.E.; Nuclear genetic variation across the range of Ponderosa pine (Pinus ponderosa): Phylogeographic, taxonomic and conservation implications. Tree Genetics and Genomes 2015, 11: 38.

Rostami, R.; Seyedi, N.; Yousefzadeh, H.; Genetic diversity of wild apple (Malus orientalis Uglitz.) in Hyrcanian Forests of Iran by SSR markers. Forest Research and Development 2019, 5: 169-179 (In Persian).

Saadati Jebeli, M.; Marashi, H.; Shahriari, F.; Seifi, A.; Fekrat, L.; Evaluation of genomic diversity of pistachio resistant and susceptible cultivars to pest psyllid using whole genome sequencing approach. Genetic Engineering and Biosafety Journal 2022, 11 (1): 64-71 (In Persian).

Salse, J.; Translational research from models to crops: comparative genomics for plant breeding. Comptes Rendus Biologies 2023, 4: 111-128.

Sadeghi, S.M.; Sardabi, H.; Kazerooni, H.; Sharifi, M.A.; Farrar, N.; Rashvand, S.; Adaptability and performance of industrial Eucalyptus species in Dashtestan, Bushehr province, Iran. Journal of Forest Poplar Research 2018, 2: 264-275 (In Persian).

Song, X.; Yang, Q.; Bai, Y.; Gong, K.; Wu, T.; Yu, T.; Pei, Q.; Duan, W.; Huang, Z.; Wang, Z.; Li, Z.; Kang, X.; Zhao, W.; Ma, X.; Comprehensive analysis of SSRs and database construction using all complete gene-coding sequences in major horticultural and representative plant. Horticulture Research 2021, 122: 2-17.

Taheri, A.; Seyedi, N.; Abdollahi Mandoulakani, B.; Mirzaghaderi, G.; Najafi, S.; Vahdati, K.; Genetic diversity in Persian walnut (Juglans regia L.) seedlings using SSR markers. Forest Research and Development 2022, 8(1): 13-26 (In Persian).

Wang, C.; Liu, X.; Peng, S.; Xu, Q.; Yuan, X.; Feng, Y.; Yu, H.; Wang, Y.; Wei, X.; Development of novel microsatellite markers for the BBCC Oryza genome (Poaceae) using high-throughput sequencing technology. PloS One 2014, 9 (3): e91826.

Wijerathna-Yapa, A.; Bishnoi, R.; Ranawaka, B.; Maya Magar, M.; Ur Rehman, H.; Bharad, S.G.; Lorenc, M.T.; Ramtekey, V.; Gohar, S.; Lata, C.; Harun-Or-Rashid, M.D.; Razzaq, M.; Sajjad, M.; Basnet, B.R.; Rice–wheat comparative genomics: Gains and gaps. The Crop Journal 2023, 1-14. 

Xie, J.; Li, Y.; Liu, X.; Zhao, Y.; Li, B.; Ingvarsson, P.K.; Zhang, D.; Evolutionary origins of pseudogenes and their association with regulatory sequences in plants. Plant Cell 2019, 31: 563–578.

Xu, P.; Kong, Y.; Song, D.; Conservation and functional influence of alternative splicing in wood formation of Populus and Eucalyptus. BMC Genomics 2014, 15, 1-12.

Zhu, L.; Wu, H.; Li, H.; Tang, H.; Zhang, L.; Xu, H.; Jiao, F.; Wang, N.; Yang, L.; Short tandem repeats in plants: Genomic distribution and function prediction. Electronic Journal of Biotechnology 2021, 50: 37-44.